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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST046699
species:
Panicum virgatum
miRNA family:
MIR399
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAATTGCCC
miRNA*
GTATATCTCCTTTGGCACG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GG
GTATATCTCCTTTGGCACG
GAGGCACGCAACCATCCGTAGGTATGTTAATGGATGGTGGCAAGCTGCTGGCTTGGAAGATGCAGCATAATAGCCGTGC
G
TGCCAAAGGAGAATTGCCC
dot-bracket secondary structure
((
(((..((((((((((((((
.((((..((.(((((((((..........))))))))).))..(((((...((....))..)))))......))).).)
)
))))))))))))..)))))
SIMILARITIES
miRBase
tae-MIR399
:
0.000000006
PMRD
tae-miR399
:
0.000000006
microPC
miR399
:
8e-64
UniProt
no hits
RFAM
mir-399: 0.000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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